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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29335751, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAQLTDEE LFSELKRSGI MPGPVTDSTR PVYLKKLKKL REEQRLRHGK VRVITNNNTV  60
   61 AAPSESEGIL KSGGDVTHKR YSRQSLAREA GKPSPILGFS SDESDVDAGL GAHGSRRSRT 120
  121 NTPQPERKSP VQHQPGTADA NADRRKVPGW WEMRRPRGDS EEDDDDEEEG TEEASNCRTM 180
  181 NGSRHSYCRD YSDTDEEEQL GQDEQASRRS RRGSSKQAKE QSLDRDELAA WPGWSREVAG 240
  241 VSHRHRGAAR KSHTAADTDG AGNLKRKSNN HLESGYNKDP PRVYFPSNSL PPRMPQSNHT 300
  301 AAPNHTKYSH YHYPDSKRQH HKVAEPEEAL LQQFKRDEVS AAGRFSAHYL SMFLLTAACL 360
  361 FFLLLGLTYL RMRGTSLPAN ENLTSTEDLN VDSKKNLMNT LQKLHEKLSK TAGDYICGNT 420
  421 DHRNISVQEA KQYLRTLGQE YENEFNNTLA WILEHSATRD IGIKCVSDPG SILNITSVKY 480
  481 LESTLPKMSF MCRIKRAVIT VAHRSSILLV GVGVLFGVWR YIKYRWAKEE EETKQMYDMV 540
  541 VKIIDVLKSH NEACQENKGL EPYTPIPHVR DSLILPQDRK KMKKVWDRAV EFLDANESRV 600
  601 RTETQKIGGA DFQVWKWIQP SSTCDKISVM PSKVWQGQAF HLDRRNSPPN SLTPCLKIRN 660
  661 MFDPVMEIGD HWDLAIQEAI LEKCSDNEGI VHIAVDKNSR EGCVYVKCLS PEFAGKAFKA 720
  721 LHGSWFDGKL VTVKYLRLDR YHHRFPQALT CSTPLKPSNT HMNSLLHLNL RTGTSNSQSC 780
  781 C

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle