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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18087608, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKRDLAILM LSGFAIFFTL QHEGDFAFKE AWFHLYDEYP VKYEADRLPP PIVADLNGDG  60
   61 KKEVLVATND AKIQVLEPHS RRVDEGFSEA RVLAEITLLP DKIRVASGRR AVAMATGVID 120
  121 RYYKNGTPQK QVVVVVTSGW SVLCFDHNLK KLWETNLQED FPHNARHREI AISISNYTLK 180
  181 HGDTGLVIVG GRMEMQPYNH MDPFEELGMT AQNADQHRRS ATENQASEDS GAINLRHFSV 240
  241 YAFAGKTGLL RWSKKTDDVE AHTSDASQLI PQHNYKLDVH ALNSRHPGEF ECREFRESIL 300
  301 SVMPHRWDRR EDTLLKLAHF RRHKRKTLKK QAGSKSTAYP FHKPEEHTPA GKDLSRKIPK 360
  361 LIGKAARYAG SAKPKKGMQY IPTITNYTKL WWVPNVVVAH QKEGIEAIHL PTGRTLCKLS 420
  421 LLEGGLHADI NGDGVLDHVQ TVGGNVGERT VVSGSMEVLK PCWAVATSGV PIREQLFNVS 480
  481 ICHHSPFNFL HYGGDYSRHF AQARDTSTLE IATPILIPRD DGHKHRKGSH GDVIFLTNRG 540
  541 EVTSYTPDVH GHDAVWQWQL QTEATWSNLP SPSGLTESGT VVPTLKPFSL RIHDNQPMIL 600
  601 AGGDQAAVII SPGGSILASI ELPSQPTHAL ITDDFSNDGL TDVIVMTSNG VYGFVQTRQP 660
  661 GALFFSSLVG CLLVVMAVIF VTQHLNSIQG KPRPSSSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle