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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28972738
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NEAKGIKILI QPQEPPPHAA HFYLYFLDYY YSFCGGGWGA VIGVAGWLQG SCFLFLLEMI  60
   61 VLLFFALLWM VDGVFSQLHY TVQEEQEHGT FVGNIAEDLG LDITKLSARR FQTVANSRTP 120
  121 YLDLNLETGV LYVNEKIDRE QICKQSPSCV LHLEVFLENP LELFRVEIEV LDINDNPPSF 180
  181 PEPDLTVEIS ESATPGTRFP LESAFDPDVG TNSLRDYEIT PNSYFSLDVQ TQGDGNRFAE 240
  241 LVLEKPLDRE QQAVHRYVLT AVDGGGGGGG GEGGGGGGGA GLPPQQQRTG TALLTIRVLD 300
  301 SNDNVPAFDQ PVYTVSLPEN SPPGTLVIQL NATDPDEGQN GEVVYSFSSH ISPRARELFG 360
  361 LSPRTGRLEV SGELDYEESP VYQVYVQAKD LGPNAVPAHC KVLVRVLDAN DNAPEISFST 420
  421 VKEAVSEGAA PGTVVALFSV TDRDSEENGQ VQCELLGDVP FRLKSSFKNY YTIVTEAPLD 480
  481 REAGDSYTLT VVARDRGEPA LSTSKSIQVQ VSDVNDNAPR FSQPVYDVYV TENNVPGAYI 540
  541 YAVSATDRDE GANAKLTYSI LECQIQGMSV FTYVSINSDN GYLYALRSFD YEQIKDFSFQ 600
  601 VEARDAGSPQ ALAGNATVNI LIVDQNDNAP AIVAPLPGRN GTPAREVLPR SAEPGYLLTR 660
  661 VAAVDADDGE NARLTYSIVR GNEMNLFRLD WRTGELRTAR RVPAKRDPQR PYELVIEVRD 720
  721 HGQPPLSSTA TLVVQLVDGA VEPQGGGGDR GGGSGEHLRP SRSGGGETSL DLTLILIIAL 780
  781 GSVSFIFLLA MIVLAVRCQK EKKLNIYTCL ASDCCLCCCC CGNGSSTCCG RQARARKKKL 840
  841 SKSDIMLVQS ANVPSNPAQV PVEESGGFGS HHHNQNYCYQ VCLTPESAKT DLMFLKPCSP 900
  901 SRSTDAEHNP CGAIVTGYSD QQPDIISNGS ILSNENKHQR AELSYLVDRP RRVNSSAFQE 960
  961 ADIVSSKDSG HGDSEQGDSD HDVTNRGQSA GMDLFSNCTE ECKALGHSDR CWMPSFVPSD1020
 1021 GRQAADYRSN LHVPGMDSVP DTEVFEPPEV QPGAERSFST FGKEKALHGT LERKELDGLL1080
 1081 SNTRAPYKPP YLTRKRIC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle