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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28972698
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRNHRFHHRH RLHHHLDHNT TRHVHNDSVA HSEHGEPGHS PSPETNKTQE QSEVKSVKVR  60
   61 RKEKGKRKKE NSEVNTPGFL PNHDHSEQYE HNRVHKLDRV HSPGHPHAHL PEHSGHELGH 120
  121 GHQELDPDNE GELRHTRKRE APHVRKSAIY STPSHKDQSE DDRQHECLNV TQLSKHFGLG 180
  181 PNSPISPDLF TYLCPALLYQ IDSRLCIEHF DKLLVEDLNK DKTLVPEDKT NIGASAWICG 240
  241 IISITVISLL SLLGVILVPI INQGCFKFLL TFLVALAVGT MSGDALLHLL PHSQGGHDHS 300
  301 HQHTHGHGHS HGHESKEFLE EYDAVLKGLV ALGGIYLLFI IEHCIRMFKH YKQQRGKQKW 360
  361 FMKQSTEEST IGRKLSDHKL NSTPDADWLQ LKPLAGTDDS VVSEDRLNET ELTDLEAQQE 420
  421 SPPKNYLGVE EEKIMDHSHS DGLHTIHEHE VHVTSHNHHD EDKAVLRKHS HQWHHRHAHH 480
  481 SHGPCHSGSD LKETGIANIA WMVIMGDGIH NFSDGLAIGA AFSAGLTGGI STSIAVFCHE 540
  541 LPHELGDFAV LLKAGMTVKQ AIVYNLLSAM MAYIGMLIGT AVGQYANNIT LWIFAITAGM 600
  601 FLYVALVDML PEMLHGDGDH EEHGFCPVGQ FILQNLGLLF GFAIMLVIAL YEDKIVYDIQ 660
  661 F

YRC Informatics Platform - Version 3.0
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