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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28972437
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.20
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAVAAEPGWQ RATLRVERRG GSCTMAAAAY EHLKLHITPE KFYVEACDDG ADDVLIIDRV  60
   61 STEVTLAVKK DVPPSAVTRP IFGILGTIHL VAGNYLVVIT KKMKVGECFN HAVWRATDFD 120
  121 VLSYKKTMLH LTDIQLQDNK TFLAMLNHVL SMDGFYFSTT YDLTHTLQRL SNTSPEFQEM 180
  181 SLLERADQRF VWNGHLLREL SAQPEVHRFA LPVLHGFITM HSCSINGKYF DWILISRRSC 240
  241 FRAGVRYYVR GIDSEGHAAN FVETEQIVHY SGNRASFVQT RGSIPIFWSQ RPNLKYKPHP 300
  301 QISKVANHMD GFQRHFDSQV IIYGKQVIIN LVNHKGSEKP LEQTFANMVS SLGSGMIRYI 360
  361 AFDFHKECKN MRWDRLSILL DQVAEMQDEL SYFLVDSAGK VVTNQDGVFR SNCMDCLDRT 420
  421 NVIQSLLARR SLQAQLQRLG VLHVGQKLEE QDEFEKTYKN AWADNANACA KQYAGTGALK 480
  481 TDFTRTGKRT QLGLLMDGFN SLLRYYKNNF SDGFRQDSID LFLGNYSVDE LESHSPLSVP 540
  541 RDWKFLALPI IMVVAFSMCI ICLLMAGDTW TETLAYVLFW GVASIGTFFI ILYNGKDFVD 600
  601 APRLVQKEKI D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle