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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28972033
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AEPAEALAMG PRALSPLASL RLRWLLACGL LGPVLEAGRP DLEQTVHLSS YEIITPWRLT  60
   61 RERREALGPS SQQISYVIQA QGKQHIIHLE RNTDLLPNDF VVYTYDKEGS LLSDHPNVQS 120
  121 HCHYRGYVEG VQNSAVAVSA CFGLRGLLHL ENASFGIEPL HNSSHFEHIF YPMDGIHQEP 180
  181 LRCGVSNRDT EKEGTQGDEE EHPSVTQLLR RRRAVLPQTR YVELFIVVDK ERYDMMGRNQ 240
  241 TAVREEMIRL ANYLDSMYIM LNIRIVLVGL EIWTDRNPIN IIGGAGDVLG NFVQWREKFL 300
  301 ITRRRHDSAQ LVLKKGFGGT AGMAFVGTVC SRSHAGGINV FGQITVETFA SIVAHELGHN 360
  361 LGMNHDDGRE CFCGAKSCIM NSGASGSRNF SSCSAEDFEK LTLNKGGSCL LNIPKPDEAY 420
  421 SAPSCGNKLV DPGEECDCGT AKECEVDPCC EGSTCKLKSF AECAYGDCCK DCQFLPGGSM 480
  481 CRGKTSECDV PEYCNGSSQF CPPDVFIQNG YPCQNSKAYC YNGMCQYYDA QCQVIFGSKA 540
  541 KAAPRDCFIE VNSKGDRFGN CGFSGSEYKK CATGNALCGK LQCENVQDMP VFGIVPAIIQ 600
  601 TPSRGTKCWG VDFQLGSDVP DPGMVNEGTK CDAGKICRNF QCVNASVLNY DCDIQGKCHG 660
  661 HGVCNSNKNC HCEDGWAPPH CDTKGYGGSV DSGPTYNAKS TALRDGLLVF FFLIVPLVAA 720
  721 AIFLFIKRDE LRKTFRKKRS QMSDGRNQAN VSRQPGDPSI SRPPGGPNVS RPPGGPGVSR 780
  781 PPGGPGVSRP PGGPGVSRPP PGHGNRFPVP TYAAKQPAQF PSRPPPPQPK ISSQGNLIPA 840
  841 RPAPAPPLYS SLT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle