YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47078061
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAPQQSPEI GREIIAAGYR TNLHDQGEGF PVLLIHGSGP GVTAWANWRG IIPQLAQTRR  60
   61 VVAPDMLGFG YSDRPADGRY HQQRWVEHAI GVLDALGIQQ ADIVGNSFGG GLALALAIRH 120
  121 PERVRRLVLM GSVGVSFPIT PGLDAVWGYE PSFASMRRLM DVFAYDRNLV NDELAELRYQ 180
  181 ASIRPGFQES FAQMFPAPRQ RWVDGLASDE ADIRALPHET LVIHGREDQV IPLAASLTLA 240
  241 EWIARAQLHV FGHCGHWTQI EHAGRFARLV EDFLAEAAPL S

Type	Start	End	Confidence
Cytoplasmic	1	126	0.51
Transmembrane Helix	127	148	0.65
Non-Cytoplasmic	149	281	0.92