YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EFNA1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFLWAPLLG LCCSLAAADR HIVFWNSSNP KFREEDYTVH VQLNDYLDII CPHYEDDSVA  60
   61 DAAMERYTLY MVEHQEYVTC EPQSKDQVRW KCNQPSAKHG PEKLSEKFQR FTPFTLGKEF 120
  121 KEGHSYYYIS KPIYHQETQC LKLKVTVNGK ITHSPHAHAN PQEKRLQADD PEVQVLHSIG 180
  181 HSAAPRLFPL VWAVLLLPLL LLQTQ

Type	Start	End	Confidence
Signal Peptide	1	18	0.98
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	205	0.95