YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125556173
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAVASTVAA RFAFFPPAPP SYGVEPPPSP SPAAAAEDGA VVELSGVPRR AGVEARRLPT  60
   61 GRGTEVVAMY VRQPGARLTL LYSHGNAADL GQMYELFVEL SSHLNVNLMG YDYSGYGQSS 120
  121 GKPSEQNTYS DIEAAYRCLV ETYGATEENI ILYGQSVGSG PTLDLASRLP HLRAVVLHSP 180
  181 ILSGLRVMYP VKHTYWFDIY KNIDKVPLVK CPVLVIHGTA DEVVDCSHGR ALWELSKIKY 240
  241 EPLWVKGGNH CNLELYPEYI KHLKKFVMAI EKLPPTKDES SGSSGPSDPC EIGSESMQSS 300
  301 RKSTDVKDKS RSSIDHRHSV DRREKPRGSI DRRDKSRKSI DHPDKPRASV DQPDRPRRSI 360
  361 DRFGGMMRSV TSVKLCNIDC FKVTYASGS

Type	Start	End	Confidence
Signal Peptide	1	23	0.65
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	389	0.99