YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IX10L_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSSCVLIF LLCNTFSSIS AFRLSRSQPT ERISGSAGDV LEDDPVGRLK VFVYELPSKY  60
   61 NKKILQKDPR CLNHMFAAEI YMQRFLLSSP VRTLNPEEAD WFYVPVYTTC DLTPNGLPLP 120
  121 FKSPRMMRSA IQLIASNWPY WNRTEGADHF FVVPHDFGAC FHYQEEKAIG RGILPLLQRA 180
  181 TLVQTFGQRN HVCLKEGSIT VPPYAPPQKM QSHLIPEKTP RSIFVYFRGL FYDVGNDPEG 240
  241 GYYARGARAA VWENFKDNPL FDISTEHPTT YYEDMQRAIF CLCPLGWAPW SPRLVEAVIF 300
  301 GCIPVIIADD IVLPFADAIP WEDIGVFVDE KDVPYLDTIL TSIPPEVILR KQRLLANPSM 360
  361 KQAMLFPQPA QPGDAFHQVL NGLARKLPHE RSVYLRPGEK LLNWTAGPVA DLKPW

Type	Start	End	Confidence
Signal Peptide	1	21	0.96
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	415	0.99