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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PMT8_ARATH
Protein type: Transmembrane
Type Confidence: 0.54
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRGRSDGGL KKRLIASVCV VALFVCFLFM YYGSSSQGAS ALEYGRSLRK LGSSYLSGDD  60
   61 DNGDTKQDDS VANAEDSLVV AKSFPVCDDR HSEIIPCLDR NFIYQMRLKL DLSLMEHYER 120
  121 HCPPPERRFN CLIPPPSGYK VPIKWPKSRD EVWKANIPHT HLAKEKSDQN WMVEKGEKIS 180
  181 FPGGGTHFHY GADKYIASIA NMLNFSNDVL NDEGRLRTVL DVGCGVASFG AYLLASDIMT 240
  241 MSLAPNDVHQ NQIQFALERG IPAYLGVLGT KRLPYPSRSF EFAHCSRCRI DWLQRDGLLL 300
  301 LELDRVLRPG GYFAYSSPEA YAQDEENLKI WKEMSALVER MCWRIAVKRN QTVVWQKPLS 360
  361 NDCYLEREPG TQPPLCRSDA DPDAVAGVSM EACITPYSKH DHKTKGSGLA PWPARLTSSP 420
  421 PRLADFGYST DMFEKDTELW KQQVDSYWNL MSSKVKSNTV RNIMDMKAHM GSFAAALKDK 480
  481 DVWVMNVVSP DGPNTLKLIY DRGLIGTNHN WCEAFSTYPR TYDLLHAWSI FSDIKSKGCS 540
  541 AEDLLIEMDR ILRPTGFVII RDKQSVVESI KKYLQALHWE TVASEKVNTS SELDQDSEDG 600
  601 ENNVVFIVQK KLWLTSESLR DSE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle