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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28268678
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.32
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGLPGHERR WTSDTVSSDK DFSGESSPGA DSGDNSCFAS EEFVEVTLDL QDDDTIILRS  60
   61 VEPATVINID APDLPVRVGI SGVSTETPTS ASVSESRSPT IRRSSSSKLR QFSQELKAEA 120
  121 VAKARQFSQE LKAELRRFSW SHGHASRAFS PSSFFQNAVV GTGNGVDSAL AARALRRQRA 180
  181 QLDRTRSSAH RALRGLKFIS NNKTNGWNEV ENNFSKLAKD GYLYRSDFAQ CIGMKDSKEF 240
  241 ALELFDALSR RRRLKVDKIS KEELYEYWSQ ITDQSFDSRL QIFFDMVDKN EDGQIAEEEV 300
  301 KEIIMLSASA NKLSRLKEQA EEYAALIMEE LDPERLGYIE LWQLETLLLQ KDTYLNYSQA 360
  361 LSYTSQALSQ NLHGLRKRSP IKRMSAKLVY SLQENWKRIW VLTLWILIMI GLFLWKFYQY 420
  421 KNKSAFQVMG YCLVTAKGAA ETLKFNMALI LLPVCRNTIT WLRSTKLSHF VPFDDNINFH 480
  481 KTVAAAIVIG IILHAGNHLV CDFPRLIHAN NKDYRDYLSN DFGQSKPGYI DLVKGVEGVT 540
  541 GIIMVILMVI AFTLATRWFR RSLIKLPKPF DRLTGFNAFW YSHHLLVIVY ILLIIHGTFL 600
  601 FLVHKWYSKT TWMYLAVPVL LYAGERTLRF FRSGLYTVRL LKVAIYPGNV LTLQMSKPPQ 660
  661 FRYKSGQYMF VQCPAVSPFE WHPFSITSAP GDDYLSIHIR QLGDWTQELK RVFSEACERP 720
  721 EAGKSGLLRA DENTKKSLPK LLIDGPYGAP AQDYRKYDVL LLVGLGIGAT PFISILKDLL 780
  781 VNIVKMEEQA DLTSDFSGNS DMSVATSEQP ALNKISPKRR KSTLRTTNAY FYWVTREQGS 840
  841 FDWFKGVMNE VAELDQKGVI EMHNYLTSVY EEGDARSALI TMVQALNHAK NGVDIVSGTR 900
  901 VRTHFARPNW KKVFSKTLTK HANARIGVFY CGAPILAKEL SKLCKEYNQK GATKFEFHKE 960
  961 HF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle