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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|222640495, gi...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKWHGGFVI VSLFIILMLR YVILDSPLAE KSLQYVFQQN NTTPLHWLDV PNPPAVQNPQ  60
   61 NISQVISTEL LASNLSITRN FSDRELQSLH SWNHLKDLVS HAHILPDGVE AIKEAGVAWR 120
  121 ELNAALEYDE SAVSVNGSTH QKSKEKQCPY SIRRMNATRS GDRFVLKIPC GLIQGSSITI 180
  181 IGTPGGLLGS FKIELTGATV PGEPDPPIVL HYNVRLLGDK LTEDPVIVQN TWTIADDWGS 240
  241 EDRCPSPGSD AKDIAKVDEL EKCGSMVGND QKQAWATKLK SNVSSIQPAW KKNTEPKKYF 300
  301 PFRQGYLAIA ILRVGAHGIH MTVDGKHVTS FAFREDLEPG FVGEVRIAGD IKLLSVIASG 360
  361 LPTTEDFEHV TDLEILKAPP VPMDKPLDLF IGIFSTANNF KRRMAVRRTW MQYDAVRSGK 420
  421 AAVRFFVGLH KNEVVNEELW NEARTYGDIQ LMPFVDYYSL ILWKTIAICI YGTNVLSAKY 480
  481 VMKTDDDAFV RVDEILLSLD RVNISHGLLY GRVNSDSQPH RDPYSKWYIT PEEWPEESYP 540
  541 PWAHGPGYIV SQDIAKEVYR KHKRGELKMF KLEDVAMGIW INEMKKDGLD VKYENDGRIL 600
  601 VEGCEEGYVV AHYQEPRDMM CLWDKFLKTK RGTCCKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle