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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CDGT_BREBE
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITPSFIISS FLSLPTVVEA SVTNKVNYSK DVIYQIVTDR FSDGNPANNP SGAIFSQNCS  60
   61 DLHKYCGGDW QGIINKMNDG YLTDLGITAL WISQPVENVY ALHPSGYTSY HGYWARDYKK 120
  121 TNPYFGNFSD FDRLVSTAHN KGIKIIMDFT PNHSSLALET NPNYVENGAL YNNGALLGNY 180
  181 SNDRNKLFHH NGGTDFSSYE DSIYRNLYDL ADYDLNNKVV DQYLKESIKL WLIKIDGIRV 240
  241 DAVKHMSEGW QTSLMSDIYT YKPVFTFGEW FLGTGEVDPQ NHHFANESGM SLLDFQFGQT 300
  301 IRSVLKDRTS NWYDFNEMIK STEKDYDEVI DQVTFIDNHD MSRFSMVVFN FQTDIALAVL 360
  361 LTSRGVPTIY YGTEQYLTGG NDPDNRKPMK TFDRSTNSYK ITSKLASLRQ RNSALGYGNT 420
  421 TERWINSDVY IYERKFGNSI VLTAVNSSNR NQTISNLNTS LPQGNYTDEL QQLLDGNTIT 480
  481 VNANGSANSP QLQANSVAVW QVTKESTSPL IGHVGPMIGK TGNTVTVSGE GFGDKKGSVL 540
  541 FGSTSAEIVS WSNTEIQVKV PNVTAGHYNL SVVNATNTKS PAYEKFEVLS GNQVSVRFAV 600
  601 NNATTNSGTN VYIVGNVSEL GNWDPNKAIG PMFNQVMYKY PTWYYDISVP AGKNLEYKYI 660
  661 KKDHNGNVTW QSGNNRTYTS PATGTDTVIS NW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle