YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66153722, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRGGHAAA AAGVSSGSED DDEEAGFSRS YFLAKEKEPS SGKKRARAAG KLSDLNLVDE  60
   61 QVLRASLAEI PPKHEREVEA LTRSYKEQYR NWLFELRCGF GLLMYGFGSK KMLLEDFAST 120
  121 TLSDFTVIVV NGYLPSINLK QVIVTVAEIF WEQTKLKRKR QTATRSQLQP FASQSIDDII 180
  181 SFLNDQTSDN GDDNVCLLIH NIDGPALRDA ESQQYLAQVS CCPQVHVVAS VDHVNAPLLW 240
  241 DKKLVHTQFK WSWYHVPTFA PYKVEGVFYP LILASGGHAQ TMKTALVVLQ SLTPNAQSVF 300
  301 RVLAEYQLAH EKEEGMHFSS LYTKCRERFL VSSQVTLNSH LTEFKDHDLV KIRKHSDGQD 360
  361 CLHIPLVSDA LEKLLQELT

Type	Start	End	Confidence
Signal Peptide	1	17	0.65
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	379	0.99