YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17946599
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGASNRILQV ALCASVFSLI CFVIAFSTPY WLVTDGRLQN QRFTNLGLWE VCFNNFQDIH  60
   61 RFFDNSFNGC LWVFEEEYYI IHDFLLPGFY ISVQLFATLC FVMCLVVIPL TVAFLRTSRD 120
  121 DDRYMVLLLA IGSCQVVGSV FGFIAVVIFG AKGDSRDWMP GWQNNDMGWS FALGVVGAVL 180
  181 LLPSGVLYLV GARRERYKRL NEISNREISE YGDEYYQNQG PSAVLPTAPS PYQSYFASEP 240
  241 SRPRRPQQSS ASNSAVQGGI QTDI

Type	Start	End	Confidence
Cytoplasmic	1	7	0.93
Transmembrane Helix	8	30	0.89
Non-Cytoplasmic	31	92	0.95
Transmembrane Helix	93	115	0.92
Cytoplasmic	116	125	0.88
Transmembrane Helix	126	149	0.94
Non-Cytoplasmic	150	168	0.92
Transmembrane Helix	169	191	0.95
Cytoplasmic	192	264	0.99