YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17946593
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERWQNRVAV VTGASSGIGS AIAKDLVLAG MTVVGLARRV DRVKELQREL PAEKRGKLFA  60
   61 LYCDVGNESS VNEAFDWIIQ KLGAIDVLVN NAGTLQPGYL VDMNPAVMQQ VLQTNIMGIV 120
  121 LCTQRAVRSM RERKFDGHVV LINSILGHKT MTATEGVAPD VNVYPPSKHA VTALAEGYRQ 180
  181 EFFGLGTRVK ITSVSPGVVD TEIVPDSIRE AIKDRMLHSE DIAQGVLYAI ATPPHVQVHE 240
  241 LIIKPLGETM

Type	Start	End	Confidence
Signal Peptide	1	23	0.80
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	250	0.96