YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17946540
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWTDLAGKVI LVTGAGAGIG QALVKQLASA GATVIAVARK PEQLQQLVAF DPVHIQPLQL  60
   61 DLSGWQAVRE GLAKVPLLDG LVNNAGVAII KPFEELTEQD FDTHFDVNIK AVFNVTQSLL 120
  121 PRLKDGASIV NVSSIASSRS FGGHTAYSAT KAALDSLTKS LALELGPRKI RVNSINPTVV 180
  181 LTKMGADNWS DPAKSGPLLA HIPLNRFCEV QEVVDATGYL LSSKSSFVNG HHILLEGGYS 240
  241 VS

Type	Start	End	Confidence
Signal Peptide	1	22	0.51
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	242	0.96