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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17946156
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKATLLTVVA LTAVVALVGA ADPECIYRRT RNLPMHWPKP LNCSSYYRCT AKNAVRTVTC  60
   61 APGKEYNPKN GKCTMAGRSL CKLSLLAPLA EATNVCSTEV NGAYIASSGS CGEFYICDEQ 120
  121 IAYPQKCDLG SFFNETLAAC IPDANSTCWQ NLCINKTNGV FVENEANCGS YYVCSNGEAT 180
  181 LQTCPQGSFF NTSVAACTVD QGNSQCWVNY CIGQDDGSAV ADKSNCSLFY VCSNNTATAQ 240
  241 ECPEGSYFES NNWGCVPGTC TTESPCDDST TTTTESCAEE TTEPPASCDC GDIKNADFIP 300
  301 DEENCRKYFI CIDGVLVAAD CGKGNVFNAN LSVCEVDADN TCCVADCTDG EAKVDPQDCT 360
  361 KYFKCQSGDW TSVSCDSGSY FNETLNCCQV DVNNVCIDAK SNSTQIPTTS TVETSSVDKC 420
  421 NAKDPPASGK NCWTYQHCIS GQWEDGTCPN NTYFDASVGI CREDTENVCP ENRSSGSRQK 480
  481 RSVEDCTCEG GIAQGTIIGH STDCDKYLIC ENGQLVEGVC GVGNVFQKSS GICVPDTKAT 540
  541 CWVCSNKPNG YQMADPTDCT SYLTCWNGLA TKHTCGSGEW YNGDGNCVID VNAKCINPCS 600
  601 CGNGNVAHPI CTNYFQCTDG VPQVKQCVVG EAFDSATGQC STTVECSAKN CATASDGTTY 660
  661 PVAGETGQFY VCLSNEATIQ PCPVNTGYSA ALGICLDQPS PDCDQTICNS AAVDSTYPSN 720
  721 DNDSSTFCLC RDSGAYIQSC PTGLFYDATD QVCTFSGNCD PQVCNDQSEY FVSPDYEDPN 780
  781 SFCLCRAGEP ITVSCPIGYT FNTEELECVL IPLPDPRCCA NGCSGKTDFS TFPTIEGTDG 840
  841 FCLCVDDVPK YISCPENSQY DLELGACTAT EEETTCPVNA CTVGICESAL DFNTFPVSSD 900
  901 PSGFCYCLDS CPIYETCLDD LVYNEDLKRC TEPEDPSVVS RCDAEKCDSI PDFTPYPSIN 960
  961 GTDGFCYCNG GLPVFRECEE NQEFDPAVGF CRTVVDSCVT ALCDANQCAT LDNYVPFPTN1020
 1021 TASDDDGAFC YCKDGEVILE QCSPEMVFSA DLGRCTVQAA PECVCAPGKC GSSDGYTTYE1080
 1081 ALNTNEGFCL CVSGTPVFTE CLNGETYNSI LGACFSSTAK IIASGLCDDR RCHSRAVVDA1140
 1141 TFAAVNTTSG YCSCQDVGVS TFINCADEHV YEESAGTCVV AACDYTSCLN RVAFEPFEAK1200
 1201 NTTEGFCSCD GVPYFHQCQT GHVFDKAQGI CLLKDTMAMI SCNLRECLKR SQFEPFAAEN1260
 1261 TNSGFCSCDD LQRVSVTYHP CGEGEIFAPE FGMCTSHSIQ KRSVEAEENV RSLNLFKKFF1320
 1321 PKLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle