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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17945829
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKIRQRNCM LIVTALVLAP CIVILMVMGP ELSTEQSLTQ RLAECHMRLQ YLESMYRARQ  60
   61 EDVALLSQYL GQLQIVNVTG ASAPPPPPPL PVVNLLDGLS PEARQLLRNA SHISKGGSAN 120
  121 GSMARSQNIR LPNAYHFLPH LLDDAGSLRP AYLQSKGRSD VSIVLGVPTV RREKQSYLLG 180
  181 TLHNLIENMN DEEQNETLII VYIGETDMES VQLIARQIES SFDQHVESGL IDIIAPAPSY 240
  241 YPNFERLRIT LNDPLERVKW RSKQNLDFAY LMAYAHSKGT FYVQLEDDIL TKRQFITTMK 300
  301 KFALIKSALT KPDQPEWFVL DFCQLGFIGK MFKSAELPYL ITYFQMFYND KPVDWLLTYF 360
  361 IESKVCRTDK DQKHCNAEKA KYWQHFRKSL FQHIGTSSSL KGKVQKLKVK QFGSKVPQYY 420
  421 AHTHNPPALV KSNIAPYKNY LLQRAYRGES YFWGLLPQPG DLVQIIFERP TQLRHYLFRS 480
  481 GNSEHPSDRF YNTTVELLPA DTLSENSSVW SSYNTTTDGY LVVGSFDSMG VAEGLLDAKI 540
  541 GAIKELRLHV HSDSENWALL SEIELQEWGS DSKSEDNAAK PRYVGGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle