YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17945567
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKFGAILGV ALVLLLQGLD VVNGRNEDIC RLFSNNTVIR DPESCSQSIT CIDSVSYYST  60
   61 CTGSTPFFDK DTGKCVKSLS TSTSSCSISC ADRAKQFVAD PKSCYGYYYC ADEETALYGT 120
  121 CPQETHFNAT TQMCSRQHES DCTTSTFEYC SIVKNGVNLD NLQGCNMYHV CEKGVLKDKT 180
  181 CSKTYYQAST GECVSKALVD CDAHPLPTDV CGKASKPYEN KFVADEATCR GYFYCAKQKD 240
  241 GTPDPNPVWN QCPQDRFFDA SSQMCITPSS VYCSHDRCDG RTASFVVSAT KGCRNYLSCS 300
  301 DGVTVSERSC GNYFFDDQQG ACTPSVQTYT ACKT

Type	Start	End	Confidence
Signal Peptide	1	24	0.94
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	334	0.99