YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17945237
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLILALTTA LHLVLVVLAH NPLSTRGESL SDGIRLVMEK RSGDVVHIRP ARGTLEAETV  60
   61 ASTTNSDTHR TRNNRKPNKP QEHSQQVGAH KSGSRKLVVA ENGGALSSQL PQPNHKQGHK 120
  121 NTDKQQRGGG SKQQRGHSQH HGGNRKGPKA ATPENGSTCR YAKSAWSNCD HKTNMRSRVL 180
  181 SLRKGEQNCL PTRTIQKKCE KGCRYEKGEW SQCVGGQITR EDKLEPEATG GSDQNCNPVR 240
  241 TVSKKCKANG NSSGGKQHGQ SRRTKEQKQK DKGASHISS

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	279	0.99