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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17945157
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAIGILLAI ALTSGFLVVS AVNLPGVPVD FDLDDHILSA IADDIAERLA REYITFLKTG  60
   61 VETAEFLKLT NQLAKSHSEK DIFTRNMPDL EPRDSFFACV ACRSVTRVLI RTIREEDGEL 120
  121 HGENSSVLMK EFAMDVCRRL NLQTEEVCEG LIDSNLPSVE YIMRNSESDS QSFCSLFMEF 180
  181 NFCNTGTNQD YNWTLTIDNT GEASAGPKSD TPTFQDSDIR ICQFSDIHHD PYYTPGSLAT 240
  241 CAEPMCCQRN KETTEGTSDA AGYWGDYRDC DLPWHAFESA LDNAVANSKC DFIYQTGDIV 300
  301 DHMVWATSVE KNTMVLTKVS ERLNAAFGDV PVYPCIGNHE PHPLNLFSPE GVPDEISTKW 360
  361 LYEHLYNDWS KWLPAETKET ILKGGYYTVV PRKGFRIIAL NSNDCYTDNF WLYHSGTDKI 420
  421 PQLQWFHDTL LEAEKNGEYV HVLTNIPSGD GTCWSVWARE FNRCVSRFRS TISGIFTGHS 480
  481 HKDELFVYYS EDEGHPTAVA WNGGAVTTYS NKNPNYREYA VNPETYTVTN HWTWIYNLTA 540
  541 ANLKPDEQPE WFLEYEFIKE FTEDMSPAGI SKLLDEFAEN PELMRKYWRY RVTSADPQVN 600
  601 GGCDRSCLAG SLCRAAVTIN SERERCEELR EKLFASLDNE ESTSSSGSTE ATTPSPSTPG 660
  661 GNDDNDGGGS STLGLLSVSS LLAIVLSIRL AL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle