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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125554485
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGLWKQSGL AGMACAADVG AAGAGRRARL AVYVLAVAFA AFTAYVAVSS SSPPPAGEGA  60
   61 SWFGGVYAST APYRAQVSGF FSSIFPTGSS TPSPEQQPPP PRRGEGGGQV SSHGIDEHAR 120
  121 VRSGAAHSVP VDPAASTKHS GSGGGGGAAS NNGGGGSAPP PGNLAGSGTP PAKGSGGDGG 180
  181 GAPANNSTSG GAPANSAVEQ SSPAGDGGGS PSTASSSAGK SSSANTGEES VDKSNKQSGS 240
  241 GGEAPSNGDA VSDKKNSTAK ADTEVAVKAS SDNSTGTGSS AKGESNVGSN SSAGSGNGVA 300
  301 SSVSSAAVNS TAVKTDAKDV VVATSTDSAG SVSDVKADLS NRSDTPPASG SGHSNHTSDV 360
  361 TVSPAKGNAK DGGADTNKAS GNVASTSNQT ASTAMVAKKA GGSPSKNQTS VASTNSKNQN 420
  421 QTSAGVASGG SSGTTSKQEE TTSQGSVGSS KDHPAQAINS KTSNYSEVLV KGNGSSTKQA 480
  481 SQKQPDKKVD WIKEMASCDM FHGNWVRDES YPLYPEGSCP HIDEPFDCYL NGRPDRAYQK 540
  541 LRWQPSSCNI PRLNPTDMLE RLRGKRLVFV GDSLNRNMWE SLVCILRNSV KDKRKVFEAS 600
  601 GRHEFKTEGS YSFLFTDYNC SVEFFRSPFL VQEWEMKVSN GKKKETLRLD IVEQSSPKYK 660
  661 DADFLIFNTG HWWTHEKTSL GKDYYQEGNH VYSELNVVDA FHKALVTWSR WIDANVNPKK 720
  721 TTVLFRGYSA SHFSGGQWNS GGSCDKETEP IRNEQYLSTY PPKMSILEDV IHKMKTPVVY 780
  781 LNITRMTDYR KDAHPSIYRK RNLTEDERRS PERYQDCSHW CLPGVPDSWN ELLYAQLLIK 840
  841 QHQMLQQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle