YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17940744
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAELKKWSFY RAVIAEFIAT LLFLYVTIAT VIGHKRLNGA NPCDGVGILG IAWAFGGMIF  60
   61 VLVYCTAGIS GGHINPAVTF GLFLARKVSL IRAVAYIISQ CLGAICGVGL VKAFMNKHYY 120
  121 NSLGGGANEV ASGYNKGTAL GAEIIGTFVL VYTVFSATDP KRSARDSHVP VLAPLPIGFA 180
  181 VFMVHLATIP ITGTGINPAR SFGAAVIYNQ DKAWDDQWIF WVGPFIGALI AALYHQFVLR 240
  241 AGAVKALGSF RSNPTN

Type	Start	End	Confidence
Cytoplasmic	1	8	0.92
Transmembrane Helix	9	32	0.87
Non-Cytoplasmic	33	50	0.84
Transmembrane Helix	51	74	0.86
Cytoplasmic	75	92	0.81
Transmembrane Helix	93	115	0.91
Non-Cytoplasmic	116	136	0.93
Transmembrane Helix	137	156	0.93
Cytoplasmic	157	168	0.86
Transmembrane Helix	169	189	0.89
Non-Cytoplasmic	190	217	0.88
Transmembrane Helix	218	238	0.93
Cytoplasmic	239	256	0.92