YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7620011
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILPKSGGG ALCLLFVFAL CSVAHSLSRD VKVVGDVEVI GYSEISKIKI PNAFSGLRVT  60
   61 IECKAADSKG HFVTRGSGEV EETGKFHLNI PHDIVGDDGT LKEACYAHLQ SAFGNPCPAH 120
  121 DGLEASKIVF LSKSGANHVL GLKQSLKFSP EVCISKFWHM PKFPLPPPLN LPPLTFPKIK 180
  181 KPCPPIYIPP VVIPKKPCPP KVAHKPIYKP PVPIYKPPVP IYKPPVVIPK KPCPPKIHKP 240
  241 IYKPPVPIYK PPVVIPKKTF PPLHKPIYKH PVPIYKPIFK PPVVVIPKKP CPPLPKFPHF 300
  301 PPKYIPHPKF GKWPPFPSHP

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	320	0.99