YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115480165, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPVQAGAAP ASPSAAAALG FLLPTCWEIE VTCAAAMILV ALYAAYELLA PRPASAAGGS  60
   61 SAAGDDLLLV RDLDGADKYK GGSSGPSAYV VKLELLAAKN LIAANLNGTS DPYALITCGE 120
  121 EKRFSSMVPG SRNPMWGEEF NFFVDSLPVK INVTIYDWDI VWKSTVLGSV IVPVESEGQS 180
  181 GPVWYTLDST SGQVCLHIKA IKVHESSSRA LNSSAEAGAR RRISLDKQGP TVVHQKPSHL 240
  241 QTIFGLPPDE VVEHSYSCAL ERSFLYHGRM YVSSWHICFH SNVFSKQIKV MLPLRDIDEI 300
  301 RRSQHAVINP AITIFLRMGA GGHGVPPLGS PDGRVRYKFA SFWNRNHTFR ALQRAVKNFH 360
  361 TMIEAEKQER AQSALRAHSS SRKSSMKEIN VPEDCADLTG QLQPFVKEEV LVTVFNGSFP 420
  421 CTAEEFFNTL LSDDSSYITE FRTARKDKDI NLGQWHHADE YDGQVRELNC KSICHSPMCP 480
  481 PYSAMTEWQH MVLSADKTDL VFETVQQVHD VPFGSFFEVH CRWSVKTTSS DSCSLNISAG 540
  541 AHFKKWCIMQ SKIKSGAVDE YKKEVQEMLE FAESYMRKVR TSNQDNGTPT EQDNGAVTEQ 600
  601 ENVAPDNTPN DE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle