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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113631460, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.28
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAAFLSSWP WDNLGAYKYV LYAPLVGKAV AGRAWERASP DHWLLLLLVL FGVRALTYQL  60
   61 WSSFSNMLFA TRRRRIVRDG VDFGQIDREW DWDNFLILQV HMAAAAFYAF PSLRHLPLWD 120
  121 ARGLAVAALL HVAATEPLFY AAHRAFHRGH LFSCYHLQHH SAKVPQPFTA GFATPLEQLV 180
  181 LGALMAVPLA AACAAGHGSV ALAFAYVLGF DNLRAMGHCN VEVFPGGLFQ SLPVLKYLIY 240
  241 TPTYHTIHHT KEDANFCLFM PLFDLIGGTL DAQSWEMQKK TSAGVDEVPE FVFLAHVVDV 300
  301 MQSLHVPFVL RTFASTPFSV QPFLLPMWPF AFLVMLMMWA WSKTFVISCY RLRGRLHQMW 360
  361 AVPRYGFHYF LPFAKDGINN QIELAILRAD KMGAKVVSLA ALNKNEALNG GGTLFVNKHP 420
  421 GLRVRVVHGN TLTAAVILNE IPQGTTEVFM TGATSKLGRA IALYLCRKKV RVMMMTLSTE 480
  481 RFQKIQREAT PEHQQYLVQV TKYRSAQHCK TWIVGKWLSP REQRWAPPGT HFHQFVVPPI 540
  541 IGFRRDCTYG KLAAMRLPKD VQGLGACEYS LERGVVHACH AGGVVHFLEG YTHHEVGAID 600
  601 VDRIDVVWEA ALRHGLRPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle