YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113631978, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASASASAT ASLSHLLLAR KPDPAPLPSR RAPALLPLPR RRGQRPISAA AAASDLLYAA  60
   61 PSLKSRLAAG ETLYGLFLLS FSPTLAELAA LAGYDYVVVD MEHGPGGVPE ALACLRALDA 120
  121 ARTPAVIRLP EAGPIWAKKA LDLGPAGLMV PAVESPAAAA AAVSHCRYPP RGVRGAAHPI 180
  181 VRASAYGLDD SYLSRCEDET LIICQVETAA GIAEVDAIAA VDGVDVVQMG PLDLSASMGY 240
  241 LWDPGNRKVR ARLREAEKKV LDARKKNVTA SDGNVAYLGG FAMPNDPAEQ LKLRGYHMVS 300
  301 GAVDIGMFRK AALEDVKRFK EAVMEIGEEE GEEDDEKKDK EDDGYWSE

Type	Start	End	Confidence
Signal Peptide	1	19	0.95
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	348	0.99