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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MGDG1_ORYSJ
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAPTASSLA AAADPALPAA FLSLPSPLLP ASPPLPAAPA PSSNAFCVPR GPARAVAVSV  60
   61 SVSAYGAGST AAASRLHRMW AEFSRFVRLH GNQIAPLGFA SLGLGVGGGG GGSGEGAGGG 120
  121 GGGGGGEVDG LVEEEGVARA EAPKKVLILM SDTGGGHRAS AEAIKAAFIQ EFGDDYQVFV 180
  181 TDLWTDHTPW PFNQLPRSYS FLVKHGPLWK MTYYGTAPRV VHQPHFAATS TFIAREVAKG 240
  241 LMKYQPDVII SVHPLMQHVP LRILRSKGLL DKIPFTTVVT DLSTCHPTWF HKLVTRCYCP 300
  301 SAEVSKRALK AGLQPSQIKV YGLPVRPSFV KPIRPEDELR RELGMDEYLP AVLLMGGGEG 360
  361 MGPIEATARA LGDALYDEVL GEPTGQILVI CGRNKKLTSR LQSINWKVPV QVKGFVTKME 420
  421 ECMGACDCII TKAGPGTIAE AMIRGLPIIL NGYIAGQEAG NVPYVVDNGC GKFSKSPEQI 480
  481 AKIVADWFGP RSDELKMMSQ NALKLARPDA VFKIVHDLHE LVRQKCFVPQ YACAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle