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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18958223, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAHQAVAF QFTVTPEGVD FQLSREVLKQ IYLSGVRSWK KRLIRIKNGI LRGVYPGSPT  60
   61 SWLVVVMTTV GSSCYNVDVS MGLVYYIQRW LPEGRPYRTP YTRTLLSMAV FSTGVWVMGI 120
  121 FFFRQTLKLL LSYHGWMFEM HGQTSHLTRV WAVCVRLLSG RRPMLYSFQT SLPKLPVPSV 180
  181 PATVHRYLES VEHLLDDEQY YRMETLAKEF EEKTAPRLQK YLVLKSWWAT NYVSDWWEEY 240
  241 VYLRGRNPLM VNSNYYVMDL VLVKNTDVQA ARLGNAVHAM ITYRRKLDRE EIKPVMALGL 300
  301 VPMCSYQMER MFNTTRIPGK DTDVLQHLPD SRHVAVYHKG RFFKLWLYEG SRLLKPRDLE 360
  361 MQFQRILDDP SPPQPGEERL AALTAGGRVE WAQARQAFFS SGKNKAALDA IERAAFFVAL 420
  421 DEESHHYDPE DEASLSLYGK ALLHGNCYNR WFDKSFTLIS FKNGQLGLNT EHAWADAPII 480
  481 GHLWEFVLGT DSFHLGYTET GHCLGKPNPV LPPPQRLQWD IPEQCQAVIE SSYQVAKALA 540
  541 DDVELYCFQF LPFGKGLIKK CRTSPDAFVQ IALQLAHFRD KGKFCLTYEA SMTRMFREGR 600
  601 TETVRSCTRE STAFVQAMVQ GRQPNEDLRR LFRKAAEKHQ NMYRLAMTGA GIDRHLFCLY 660
  661 VVSKYLGVES PFLAEVLSEP WRLSTSQIAQ FQIRMFDPNK HPKHLGAGGG FGPVADDGYG 720
  721 VSYMIAGENT IFFHVSSKFS SSETNAQRFG NQIRQALLDI ANLFQVSKAD G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle