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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50511003
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGGQERRRRV RRAAGRGQRR GRSNMAPGGG GGRRDGWPAR GRLLLAALLL LWTRAASGQS  60
   61 SPQQSVILGM RLASCNKSCG MNPDGIIFVS EGSTVNLRLY GHSLGDISSN LISFTEVDDA 120
  121 EAVHNSTNCL ELTKDLVVQR LVNVSRGNTS GMLVVITKFL RRSENMKLYA LCTRPRADGP 180
  181 WTRWTDKDSL LFMVEEHGRF LPLWLHILLV MVLLVLSGIF SGLNLGLMAL DPMELRIVQN 240
  241 CGTEKERKYA RKIEPIRRKG NYLLCSLLLG NVLVNTSLTI LLDNLIGSGI MAVASSTIGI 300
  301 VIFGEILPQA LCSRHGLAVG ANTIVLTKVF MLLTFPLSFP ISKLLDFVLG QEIRTVYNRE 360
  361 KLMEMLKVTE PYNDLVKEEL NMIQGALELR TKTVEDIMTQ LHDCFMIRSD AILDFNTMSE 420
  421 IMESGYTRIP VFEDEQSNIV DILYVKDLAF VDPDDCTPLK TITRFYNHPV HFVFHDTKLD 480
  481 AMLEEFKKGK SHLAIVQKVN NEGEGDPFYE VLGLVTLEDV IEEIIKSEIL DESDMYTDNR 540
  541 TRKRVSVKNK RDFSAFKDTD NELKVKISPQ LLLAAHRFLA TEVPQFSPSL MSEKILLRLL 600
  601 KYPDVIQELR FNEHNRYCVR HYLYTRNKPA DCFVLILQGK VEVEAGKENM KFETGAFSYY 660
  661 GTMALSVAPP DRSPALPTPL SRSASLSYPD RNTDLTSTSL AGSNQFGSCI LGQYVSDFSV 720
  721 RALTDLQYIK ITRQQYQNGL MASRMDNSPQ PTFDGCATCS ENFMERPELP PVDETTTLLN 780
  781 ERNSLLHRAS EEETI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle