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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7547007, gi|1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESCDCIDPP WPGDELLMKY QYISDFFIAL AYFSIPLELI YFVKKSAVFP YRWVLVQFGA  60
   61 FIVLCGATHL INLWTFGMHS RNVEVVMTTA KVLTAVVSCV TALMLVHIIP DLLSVKTREL 120
  121 FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLIEL GRTLSLEECA 180
  181 LWMPTRTGLE LQLSYTLRQQ NPVGFTIPIQ HPVINQVFSS NRAVKISPNC PVARLRPLAG 240
  241 KYMPGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA 300
  301 DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA VRARNDFLAV MNHEMRTPMH 360
  361 AIIALSSLLQ ETELTPEQRL MVEAILKSSS LLATLINDVL DLSRLEDGSL QLENGTFNLH 420
  421 ALFREVLYLI KPIASVKKLF VSSSLAPDLP EFAVGDEKRL MQIMLNVVGN AVKFSNEGNI 480
  481 SIFAFIAKSE SLRDSRAPDF FPVHSDNHFY LRVQVKDSGA GIDPQDISKL FTKFAQCQSL 540
  541 AARNSGGSGL GLAICKRFVN LMGGHIWIES EGLGKGSTAV FIVKLGIPEY SNESKLPFFP 600
  601 KVSANHCQTN FPGLKVLVMD DNGVSRSVTK GLLVHLGCDV TTVSSADDCL RVVSQEHNVV 660
  661 FLDVCMPGVD GYEVAIRIHE KFTTCRQGPL LVALMGNTDR VTKENYLRVG INGVVLKPVS 720
  721 VDKMRCVLSE VLEHRFLFET C

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle