YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50510435
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RMATPASTPD TRALVADFVG YKLRQKGYVC GAGPGEGPAA DPLHQAMRAA GDEFETRFRR  60
   61 TFSDLAAQLH VTPGSAQQRF TQVSDELFQG GPNWGRLVAF FVFGAALCAE SVNKEMEPLV 120
  121 GQVQDWMVAY LETRLADWIH SSGGWAEFTA LYGDGALEEA RRLREGNWAS VRTVLTGAVA 180
  181 LGALVTVGAF FC

Type	Start	End	Confidence
Cytoplasmic	1	168	0.89
Transmembrane Helix	169	191	0.89
Non-Cytoplasmic	192	192	0.97