YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|505098
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VRVSVGGLVG EVACACRDCI PETMAEGDNR STNLLAAETA SLEEQLQGWG EVMLMADKVL  60
   61 RWERAWFPPA IMGVVSLVFL IIYYLDPSVL SGVSCFVMFL CLADYLVPIL APRIFGSNKW 120
  121 TTEQQQRFHE ICSNLVKTRR RAVGWWKRLF TLKEEKPKMY FMTMIVSLAA VAWVGQQVHN 180
  181 LLLTYLIVTS LLLLPGLNQH GIILKYIGMA KREINKLLKQ KEKKNE

Type	Start	End	Confidence
Cytoplasmic	1	64	0.99
Transmembrane Helix	65	84	0.96
Non-Cytoplasmic	85	89	0.79
Transmembrane Helix	90	111	0.89
Cytoplasmic	112	156	0.96
Transmembrane Helix	157	176	0.91
Non-Cytoplasmic	177	181	0.81
Transmembrane Helix	182	204	0.88
Cytoplasmic	205	226	0.93