YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|577295
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AAVAAVAARR RRSWASLVLA FLGVCLGITL AVDRSNFKTC EESSFCKRQR SIRPGLSPYR  60
   61 ALLDSLQLGP DSLTVHLIHE VTKVLLVLEL QGLQKNMTRF RIDELEPRRP RYRVPDVLVA 120
  121 DPPIARLSVS GRDENSVELT MAEGPYKIIL TARPFRLDLL EDRSLLLSVN ARGLLEFEHQ 180
  181 RAPRVSQGSK DPAEGDGAQP EETPRDGDKP EETQGKAEKD EPGAWEETFK THSDSKPYGP 240
  241 MSVGLDFSLP GMEHVYGIPE HADNLRLKVT EGGEPYRLYN LDVFQYELYN PMALYGSVPV 300
  301 LLAHNPHRDL GIFWLNAAET WVDISSNTAG KTLFGKMMDY LQGSGETPQT DVRWMSETGI 360
  361 IDVFLLLGPS ISDVFRQYAS LTGTQALPPL FSLGYHQSRW NYRDEADVLE VDQGFDDHNL 420
  421 PCDVIWLDIE HADGKRYFTW DPSRFPQPRT MLERLASKRR KLVAIVDPHI KVDSGYRVHE 480
  481 ELRNLGLYVK TRDGSDYEGW CWPGSAGYPD FTNPTMRAWW ANMFSYDNYE GSAPNLFVWN 540
  541 DMNEPSVFNG PEVTMLKDAQ HYGGWEHRDV HNIYGLYVHM ATADGLRQRS GGMERPFVLA 600
  601 RAFFAGSQRF GAVWTGDNTA EWDHLKISIP MCLSLGLVGL SFCGADVGGF FKNPEPELLV 660
  661 RWYQMGAYQP FFRAHAHLDT GRREPWLLPS QHNDIIRDAL GQRYSLLPFW YTLLYQAHRE 720
  721 GIPVMRPLWV QYPQDVTTFN IDDQYLLGDA LLVHPVSDSG AHGVQVYLPG QGEVWYDIQS 780
  781 YQKHHGPQTL YLPVTLSSIP VFQRGGTIVP RWMRVRRSSE CMKDDPITLF VALSPQGTAQ 840
  841 GELFLDDGYT FNYQTRQEFL LRRFSFSGNT LVSSSADPEG HFETPIWIER VVIIGAGKPA 900
  901 AVVLQTKGSP ESRLSFQHDP ETSVLVLRKP GINVASDWSI HLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle