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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113610632, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSSTSTSS LLLLLSPRGN PRRLLPLLLP LRLSSSSSAA AAAAAMPPRR DRHHGKQPQQ  60
   61 QWKPKATDPA AAAPAVVAAA SSPASSTSSS ADFAGGVERM TISPSPQGGA SQVWVPRGYA 120
  121 TSASSSSSSS SAAAAEQRID AEKLSRVFKA APNFEVDNNT FIQSQIRATF YPKFENEKSD 180
  181 QETRTRMIEM VSHGLATLEV TLKHSGSLFM YAGHHGGAYA KNSFGNIYTA VGVFVLGRLF 240
  241 REAWGKEAPR MQEEFNVFLE KKCISISMEL VTAVLGDHGQ RPKDDYAVIT AVTELGHGKP 300
  301 KFYSTPEVIE FCRKWRLPTN HVWLFSTRKS ASSFFAAYDA LCEEGTATSV CKALDEIADV 360
  361 AVPGSKDHVK VQGEILEGLV ARIVSRESSV QIEEVLRNYP LPPLDGVGSD LGPSLREICA 420
  421 ANRSDEKQQI KALLENVGPS MCPDHSDWFG CSGLDDHQSP SANRSVVTKF LQAHPTDYTT 480
  481 KKLQEMIRVM KQRNFPAAFK CYWNYHKIDS LSNDSLYYKM VIHVLSDSVF RRYQQEMRRN 540
  541 QGLWPLYRGF FVDVNLFKVN NMKSSIPSED IDTSLKNING ALDSNSSAKD GLADEDSNLM 600
  601 VKLKFLTYKL RTFLIRNGLS TLFKDGPSAY KTYYLRQMKN WGTSASKQKE LSKLLDEWAV 660
  661 YIRRKYGNKP LSSSTYLSEA EPFLEQYAKR SPENQALIGA AGDLVQTENF LAILEAKRDE 720
  721 EGDLQAERGT APPSPTSTSL DVVPKAEGLI VFFPGIPGCA KSALCKEILT TPGGLGDNRP 780
  781 LHSLMGDLIK GRYWQKVADE RKKKPFRITL ADKNAPNEEV WRQIEDMCRT TKAAAVPVIP 840
  841 DSEGTDSNPF SLDALAVFMF RVLQRDNHPG NLDKASPNAG YVLLMFYNLY DGKSRREFES 900
  901 ELYERFGSLV KMPLLKPDRA PLPDEVKAIL DEGISLFRLH QSRHGRAEPS KGAYAKEWAQ 960
  961 WEKRLRQVLF ANKDYLNSIQ VPFDFAVKEV LEQLKSVAKG DLKTPDTAKR KFGNIVFAAV1020
 1021 TLPPADILGA LPKLAEDTDA NKFLNNTKLA DNLTKAHVTL AHKRAHGVAA VSSYGVYQNH1080
 1081 QVPVIFNAFL FSDKMAALEV ELGTVNGEKI ASRNDWPHAT LWTAPGVAPK EANTLPQLVT1140
 1141 EGKAKRVAID PPITISGVLD FY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle