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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14587826
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FDRFVYRVRV LEDVFNGTLV INLNATDPDE GTNGDIIYSF RRPVSPAVVH AFNIDPNSGE  60
   61 VRTKGLLDFE EIKLYEIPVE AVDKGNIPMT GHCTLLVEVL DVNDNAPEVT ITSLSLPVKE 120
  121 DAQPSTVIAL VSVSDRDSGD NGQVTCSLTP HLPFKLVSTF KNYYSLVLDS ALDRETTADY 180
  181 KVVVTARDGG SPSLWATASV SVEVADVNDN VPVFAQPEYT VFVKENNPPG AHIFTVSAVD 240
  241 TDAQENALVS YSLVERRVGE RLLSSYVSVH AESGKVFALQ PLDHEELELL QFQVSARDAG 300
  301 VPALGSNVTL QVFVLDENDN VPTLLPHRAV GAGGAVSELV PRSVGSGHVV AKVRAVDADS 360
  361 GYNAWLSYEL QLAAGAMSSP FRVGLYTGEI STTRALDEAD APRQRLLVLV KDHGEPALTA 420
  421 TATVLVSLVE NGQAPKISSL ASESIASSEA SLVTVNVYLI IAICAVSSLL VLTLLLYTAL 480
  481 RCSARPINGA CVPGKPMLVC SSAVGSWSYS QQRRQRVCSG EGPPKTDLMA FSPSLPPVLG 540
  541 SAEDTCQRER QVEHLKEPRQ PNPDWRYSAS LRAGMHSSVH LEEAGILRAG PGGPDQQWPT 600
  601 VSSATPEPEA GEVSPPVGAG VNSNSWTFKY GPGNPKQPGP GELPDKFIIP GSPAIISIRQ 660
  661 ESANNQIDKS DFITFGKKEE TKKKKKKKKG NKTQEKKEKG NSTTDNSDQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle