YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|441052
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLLIILGIC LSCVVLLSLW KKTHGKGKLP PGPTPLPVVG NLLQLETKNI NKSLSMLAKE  60
   61 YGSIFTLYFG MKPAVVLYGY ETVKEALIDR GEEFSGRGIF PVFDRVTKGL GIVFSSGEKW 120
  121 KETRRFSLTV LRNLGMGKKT IEERIQEEAL CLIQALRKTN ASPCDPTFLL FCVPCNVMCS 180
  181 VIFQNRFDYD DEKFKTLIKY FHENFELLGT PWIQLYNIFP ILHYLPGSHR QLFKNIDGQI 240
  241 KFILEKVQEH QESLDSNNPR DFVDHFLIKM EKEKHKKQSE FTMDNLITTI WDVFSAGTDT 300
  301 TSNTLKFALL LLLKHPEITA KVQEEIEHVI GRHRSPCMQD RTRMPYTDAV MHEIQRYVDL 360
  361 VPTTLPHAVT QDIEFNGYLI PKGTDIIPSL TSVLYDDKEF PNPEKFDPGH FLDESGNFKK 420
  421 SDYFMPFSAG KRACVGEGLA RMELFLLLTT ILQHFTLKPL VDPKDIDPTP LENGFVSVPP 480
  481 SYELCFVPV

Type	Start	End	Confidence
Signal Peptide	1	25	0.92
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	489	0.99