YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7453855
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKSMSYCIV LVVLLALSPL CFCHKVVQGG YLYPQFYDHS CPQAQQIVKS VVAQAVSRDR  60
   61 RMAASLLRLH FHDCFVKGCD ASVLLDNSGS IVSEKGSKPN KNSIRGFEVI DEIKAELERA 120
  121 CPHTVSCADI LAIAARDSTV ISGGPNWEVP LGRKDSRGAS LSGSNNDIPA PNNTFNTILT 180
  181 KFKRQGLNLV DLVALSGAHT IGNARCVSFK QRLYNQNQNG QPDPTLNALY ASQLRNQCPR 240
  241 SGGDQNLFFL DHESPFNFDN SYYRNILANK GLLNSDQVLL TKNHKSMKLV KQYAENVELF 300
  301 FDHFAKSVVK MGNISPLTGM KGEIRANCRR INAY

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	334	0.99