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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6166501
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSQLWLLLI LSLLTLEGPQ PSTGSGYTTK SSVDLLENDS RYISYQDLMS TAKRFYDPET  60
   61 TWYSEMLFDV ARNQVIVGAR DTLHRMSFDL EPLERASWGA TPSEIAMCQA KGQSERWCHN 120
  121 YVRVLHSYGE NQLYACGTNA FQPSCSWRQM ENLTVTGVDS GVVKCPFHPQ ANSTSLLQSN 180
  181 GQLFVGTATD FSGSDVAILR TGVESNKRFL RTKQYNNNWL SGAQFVGSFE AGHFVYFLLR 240
  241 ESAAEHMSCG KVIYSRVARV CKNDVGGGGQ LLRDNWTSFL KARLNCSLPV EYPYYFDEIQ 300
  301 GMTYAESESI LYATFRTSGS SIFGSAVCAY NLSSINAAFD GPFKQHSDAA WKTVNTNQRS 360
  361 QFQCGTSSIG HWLESSRYQL MDEAVQPIGA EPLYHSKLEQ FGRLALDIIN TKTEQVHVLF 420
  421 VASSGNHIKK LSVKYDGDGV QTCLVELWQA DDTGTSSLLN MAYLKVSDSL YLGTDLALTR 480
  481 IPAQHCSRHV SQSSCLNSMD PYCGWNELVE RCMPQPQDSS VLQHWDQAPQ ITCPVLNAPI 540
  541 DGGWSTWSPW AVCQQHEQPD SNCQCRQRSC NNPQPQHGGA TCEGISTQVT NCTQHGGWTE 600
  601 WSAWSPCSQT CGIAVKIRRR TCGNPRPAFG GRTCVGSEQS EMYCRHLPPC PVAKPQSVDG 660
  661 GWGPWGEWSE CSAQCGGGFR MRRRECNDPA PLNGGMECPG CRLDYEECNM QSCQEVRKLS 720
  721 AWTPWLTVTG SGNSSEPHTE RRFRFVCRAT SPDPSSVRIG LPKEESRNCH ADGSCQRQVD 780
  781 HDSADSDAAD WSPCSVSCGG GVQQRHRGRG SQSRVCNMHA CPAEEQLSSN SLDNEVEHGE 840
  841 WGCWSEWSAC SVTCGLGLRR RTRRCLAGHD RLCQGRALEE QKCEMVPCEN FLGWSAWSEW 900
  901 SSCSSDGIRL RHRRCLVEQP GSMECRGAEF EKTACVPNEC EETQTASTAT LPIVIFVGLL 960
  961 FTVACCLATY RFTKKRFMLS AEEALNKTTT TTASFDTYPN QYSSLPTKDY YDQRPKRQSS1020
 1021 FRMPAKTSNL GNGNGTLNRN NMHQNNTPKV LAKTYIDCES GTIKRQSALN NCRSNIDDEK1080
 1081 F

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