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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50252111, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFFRTVLGF FGFGVGVTMG LVIGYYLFIY FQPTDVKDPV IRPLVELDTK SLESMLPEVP  60
   61 HWVKNPDFDR IDWLNKFVEN IWPYLDKAIC KTAKEIAKPI IAENTAKYKI DSVEFETLTL 120
  121 GSLPPTFQGM KVYTTDEQEL IMEPSIKWAG NPNITVVVKA FGLKATAQVI DLHVFALPRI 180
  181 TLKPLVPSFP CFAKIVVSLM EKPHVDFGLK LLGADLMAIP GLYVFVQEII KTQVANMYLW 240
  241 PKVLEVPIMD PAKAQKKPVG ILHVNIVRAV KLTKKDFLGK SDPYVKLKLT EEKLPSKKTS 300
  301 VKRSNLNPEW NEDFKLVVKD PESQALELTV YDWEQVGKHD KIGMSVIPLK ELIPDEAKSL 360
  361 TLDLHKTMDA NDPANDKFRG QLTVDVTYKP FKEGDSDVDT SDESGTIEKA PDGTPEGGGL 420
  421 LVVIVHEAQD VEGKHHTNPY VRIVFRGEER KTKHIKKNRD PRWEQEFQFV CEEPPINDKM 480
  481 QIEVISRPPS IGIHSKENLG YVVISLADVI NNKRINEKYH LIDSKNGRIQ LELQWRTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle