YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3335132
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGTSSYWE GEARRPPDLR KQARQLENEL DLKLVSFSKL CTSYSHSSTR DGRRDSSDTT  60
   61 PLLNGSSQDR MFETMAIEIE QLLARLTGVN DKMAEYTNSA GVPSLNAALM HTLQRHRDIL 120
  121 QDYTHEFHKT KANFMAIRER ENLMGSVRKD IESYKSGSGV TTRGTELFLK EHDHFRNSDR 180
  181 LIEETISIAM ATKENMTSQR GMLKSIHSKM NTLANRFPAV NSLIQRINLR KRRDSLILGG 240
  241 VIGICTILLL LYAFH

Type	Start	End	Confidence
Cytoplasmic	1	234	0.94
Transmembrane Helix	235	254	0.96
Non-Cytoplasmic	255	255	0.94