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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18412427, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGVFLKMSV VGVSPMIPVG PSSFICAIGG SVEEKSTAAS LPRWVSLRRL RPLEFLRIGG  60
   61 KREEKGTVRD DDAVLLERRD RNRNENDNGN WVLKILEVGS IWKGKRQRSG GGGGGEEDEE 120
  121 EEVAEPKKKE DLCEECDFCR IDDDDEDEEK EKTVFEFSEM LSKIPVEDAQ MFAKLSFLGN 180
  181 LAYSIPKIKP ENLLKYQKLR FVTSSIEKRM SLKVEENNNG EEDEEKKKLI NPAVAYRIAA 240
  241 SAASRLFSHS KSVLPFGSSK RQDNEEASLL ATADSVTAVV AAKEEVKQAV ADDLKSNRSP 300
  301 PCEWFVCDDD KSGTRFFFIQ GSDSLASWQA NLLFEPVPFE DLDVLVHRGI YEAAKGIYEQ 360
  361 MLPEVHAHLN SRGKNRAFLR FSGHSLGGSL SLLVNLMLLI RGQVPASSLL PVITFGSPCI 420
  421 MCGGDRLLQK LGLPKSHLLG ISMHRDIVPR AFSCNYPNRA AKLLKALNGN FRNHPCLNNQ 480
  481 NVLYSPMGKL LILQPSERFS PPHPLLPPGS GLYLLASKNT DETEKSLRAA KILFFNSPHP 540
  541 LEILSDRRSY GSEGKIKRNH DMSSYLKALR HVIRKELKQM KAERDQWLRK FFIINILFSG 600
  601 RDSLKLITRF VASRSSQLVI IFFLPIRLLI MSVYSVVFHH SQAHFSFFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle