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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7407123
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESCNCIEPQ WPADELLMKY QYISDFFIAL AYFSIPLELI YFVKKSAVFP YRWVLVQFGA  60
   61 FIVLCGATHL INLWTFSMHS RTVAIVMTTA KVFTAAVSCA TALMLVHIIP DLLSVKTREL 120
  121 FLKNKAAELD REMGLIRTHE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA 180
  181 LWMPTQTGLE LQLSYTLHQQ NPVGYTVPIQ LPVISQVFTS NHAVKISPNC PVARLRPLAG 240
  241 KYMPGEVVAV RVPLLHLLNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA 300
  301 DQVAVALSHA AILEESMRAR DLLVVQNIAL DRARREAETA ICARNDFLSV MNHEMRTPMH 360
  361 AIIALSSLLQ ETELTPEQRL MVETILKSGN LLATLINDVL DLSRLEDGSL QLQLGTFNLH 420
  421 AVFKEVLNLI KPIASVKKLL VALNLAPDLP EYAVGDEKRF MQTLLNVVGN AVKFTKEGNI 480
  481 LITAFVAKSE SFLDSRTPEF FPVPSDNHFY LRVQVKDSGS GISPQDIPKL FTKFAQNQSI 540
  541 ATRNSHGSGL GLAICKRFVN LMEGHIWIES EGLGKGCTAV FVVKLGIPES SNESKLSFMP 600
  601 KMSGPQTNFT GLKVLVLDDN GVSRSVTKGL LVHPGCDVMT VGSSEECLHV VSQEHKVVFM 660
  661 DVGIPGIDGY EVAVHIHQKF TRRHERPLIV ALTGNTDKIT KENCMSVGMD GVILKPISLE 720
  721 KMRSVLLGLL EHRVLFEAI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle