YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|185134138, gi...
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADTEGAEEI YPGILQEIFT SPLNLSLLGL CIFLLYKIFR GDKPADMGEV EEPLPKLKKR  60
   61 DFTLTELQPY DGLQNPRILM AVNFKVFDVT RGKKFYGPEG PYGVFAGKDA SRGLATFCLE 120
  121 KEALKDTHDD LSDLNAMQQE SLNEWETQFT QKYDYVGKLL KAGEEPTEYT DDEEVKDKKK 180
  181 D

Type	Start	End	Confidence
Non-Cytoplasmic	1	17	0.92
Transmembrane Helix	18	39	0.63
Cytoplasmic	40	181	0.66