YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7385184
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVPPSKPTVS IPSSVTIGNR AVLTCSEHDG SPPSEYSWFK DGVPMLTADA KKTRAFINSS  60
   61 YTIDPKSGDL VFDPVSAFDS GEYYCEAQNG YGTAMRSEAV RMEAVELNVG GIVAAVLVTL 120
  121 ILLGLLIFGI WFAYSRGYFE RTKKGTAPGK KVIYSQPSAR SEGEFKQTSS FLV

Type	Start	End	Confidence
Cytoplasmic	1	108	0.70
Transmembrane Helix	109	132	0.91
Non-Cytoplasmic	133	173	0.70