YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17862012
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPHNDSKDS KPCIGLLNPD QEDQMKVCGY RRSLMRTGFC WACIFLTGGL LRLVLHWWRH  60
   61 LYLYATCSQC SLEEAEQVLV TEDYQGKHKM YHVKQIQVLT SSNLKTLLEK EQQSIERTHI 120
  121 ECDHVENVLQ LSVHFTSAQF KKCSSIRIFR CKQLVYAWNN NTNRFQRING LDLNIPCSYY 180
  181 HQQRGLPVHE QISRRIVFGD NEITVPLRDF KTLLFLEVLN PFYVFQLFSV ILWFTYDYY

Type	Start	End	Confidence
Cytoplasmic	1	36	0.68
Transmembrane Helix	37	58	0.81
Non-Cytoplasmic	59	239	0.65