YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17862254
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVQGFVTMS FIIVFLVLAL LSLTIIRLPL KAVLQYEWLL VRLSYMGTAI SSLFMFLAVC  60
   61 IFGGCAYRRD WMMYPKFNVL GWSYALAVVT FMLLGLAALI LQREARQAYD ARGEQKNLVM 120
  121 QMEMQEPGYQ PPRHHHSQSR SLQGYI

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.68
Transmembrane Helix	7	28	0.92
Cytoplasmic	29	42	0.64
Transmembrane Helix	43	66	0.88
Non-Cytoplasmic	67	79	0.69
Transmembrane Helix	80	101	0.93
Cytoplasmic	102	146	0.74