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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17862798
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIRSVHLGG LFHAEEEIQM TSTMPNFVGQ MQGLVFNGQR YLDIVKSLGP ELSALPSATF  60
   61 KLTARFVNSP AGQPYHAATF RSKHSYVGLA MLKAYNSISI DFRFKTVEPN GLLVFNGGRR 120
  121 NDFVAVELVN GHIHYTFDLG DGPVTMRDKS RIHMNDNRWH QVSIRRPGPK THTLTVDDSF 180
  181 EIISLTGNNM HLELAGILYI GGVFKDMYSK LPASISSRSG FEGCLASLDL GDASPSLTSD 240
  241 AVVPSSLVVS GCEGPTKCSQ NACANRGNCV QQWNAYACEC DMTSYTGPTC YDESIAYEFG 300
  301 NNKGMVQYTF PENAQADTEE DNIALGFITT RPDAVLLRVE SATTQDYMEL EIVEGNIFMV 360
  361 YNIGSVDLPL GEIGTKVNDN AYHVVRFQRK GGNATLQLDD YNVQALTPQS HHSTVFNTMS 420
  421 NVQVGGKFSR NGRNRIERPF AGVIAGLSVN KLRILDLAVE RDPHITIRGD VQLVTGVLDR 480
  481 NDLQRMQQTP ASGYPGALDD LIFSGAGSGC RGDDEDECTP PFESGSGDDL ITPVYVPPTK 540
  541 QTTTSQQGNS LSTGGSSSGG VITNGTERAC DDEDCVHGSG DYGETTEQFT STSTARGSES 600
  601 NNEMVTITTT GRSDVTTEQH QGSSSSSSSG STPSYATTQS SSSSSSGGSA ASTPGQVSTT 660
  661 SSVATSSTQR ATSSSTSTSS STTSTTTTTT TTQATPPPEI RSTVTERETT PYDIYIAGGG 720
  721 MGGSGRNDHD RMQLPDEHHP LPPLPPPIPP QDPPPYGPYG GNTYNTNMNN YRPKGKGGRI 780
  781 NSIEEERTAM IIGIVAGILI AVVLVILLVL WLKSNGDRGY KTESEKAAAY GSHNPNAALL 840
  841 GNTSTNGSYH QQRQHHMHGG GGGGGAGQQQ HHAQQQMHNG HNGNGNGGGG GGGGMMSSGS 900
  901 GSLGYGSDGR PQMAGLVQPK AKKRDSKDVK EWYV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle